Insertion junction: LMJ.RY0402.247510_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.247510
Chromosome:chromosome_3
Location:4745468
Confidence (%):95
Locus systematic id Locus common name Defline Orientation Feature
Cre03.g178100 Lipoxygenase sense intron

Insertion site details

Flanking sequence (orientation from cassette outwards):CGTACCCAGAACCCCCAAAACAGGCCCCAG
Internal bar code:TGTTAAACCTCTCAGGGTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:209
LEAP-Seq percent confirming:98.75
LEAP-Seq n confirming:158
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GCATATTCTTGCGTTCCGTT
Suggested primer 2:CCGTTTTGAATGTGTCATGC