Insertion junction: LMJ.RY0402.247564_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.247564
Chromosome:chromosome 9
Location:3327773
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g388430 (1 of 2) IPR000104//IPR001202 - Antifreeze protein, type I // WW domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTGAAGGTTGCCTTGGATATCGGATGG
Internal bar code:ATGTCGAAAAGATCGCAGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:469
LEAP-Seq percent confirming:99.5381
LEAP-Seq n confirming:431
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTCTGTGTGATGTGGT
Suggested primer 2:GACTTGACCTGTCCCATCGT