Insertion junction: LMJ.RY0402.247586_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.247586
Chromosome:chromosome 9
Location:6843255
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g409801 (1 of 2) PTHR11373:SF4 - DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCCTCCCCTTCCTCCCCACACGCGCAC
Internal bar code:TACGCCCGCAAATTCTGCTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1034
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:156
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTGATGCCCTCAATCTGGTT
Suggested primer 2:GTCACACTCCGTTGTGGATG