Insertion junction: LMJ.RY0402.248047_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.248047
Chromosome:chromosome 4
Location:3854397
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g230144 SPT1 Component of serine palmitoyltransferase; (1 of 1) PTHR13693//PTHR13693:SF3 - CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE // LD36009P 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATCGGCCTATCTCGAACGCTTTAGTACA
Internal bar code:TTACGCTCTGGCGACGAAGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:548
LEAP-Seq percent confirming:99.0155
LEAP-Seq n confirming:704
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGTCCTGCGTTTACGTT
Suggested primer 2:CCAAGACTGACAGAGGCACA