Insertion junction: LMJ.RY0402.248066_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.248066
Chromosome:chromosome 3
Location:5437357
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g185150 (1 of 11) IPR023109 - Integrase/recombinase, N-terminal CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCCGGACGTCCGCGTCGAAAGAGCGAGC
Internal bar code:GGCTGTGCGCCAAACTACTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:184
LEAP-Seq percent confirming:97.8307
LEAP-Seq n confirming:1849
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCACCTTGTCCTTCTTC
Suggested primer 2:CATTGTGCAACACCCTTCAC