Insertion junction: LMJ.RY0402.248088_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.248088
Chromosome:chromosome 3
Location:3725080
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g169550 AOX2 Alternative oxidase; (1 of 2) PTHR31803:SF3 - ALTERNATIVE OXIDASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAACGGAAAGGAGCAGCAGTTGCTACAG
Internal bar code:TGTCGCCAATGCAGCCCTCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:577
LEAP-Seq percent confirming:98.9744
LEAP-Seq n confirming:1351
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTGGCCTGTACTTTCAT
Suggested primer 2:AAATAAAGGTGCGTGGATGC