Insertion junction: LMJ.RY0402.248217_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.248217
Chromosome:chromosome 3
Location:8201710
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g200050 CAL1 (1 of 2) PF13202//PF13833 - EF hand (EF-hand_5) // EF-hand domain pair (EF-hand_8); Calpain family cysteine protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGAAAAAGGAGGTCACAGTGGGGTGAAT
Internal bar code:TGGCCGACTGCATGAGTGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:529
LEAP-Seq percent confirming:99.7537
LEAP-Seq n confirming:1215
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCACGTTCAGTGGTTTG
Suggested primer 2:GCTCTGCTTCAAACCCTCAC