Insertion junction: LMJ.RY0402.248367_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.248367
Chromosome:chromosome 2
Location:2883129
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g094900 (1 of 1) PTHR23083//PTHR23083:SF427 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGTAGTCGGTGACGGCGCTCTCGTACTC
Internal bar code:GGGGAGCGTCGGTTAGGGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:299
LEAP-Seq percent confirming:95.6149
LEAP-Seq n confirming:1003
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTACCGGTTAGTGGTGTGGC
Suggested primer 2:ATTGGGTCTCTCCCCAGTCT