Insertion junction: LMJ.RY0402.248566_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.248566
Chromosome:chromosome 3
Location:4471840
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g175926 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGTCGTTTGCACGTGCATGCCCCGCGAT
Internal bar code:AGTGATCGTTATCACTCGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:228
LEAP-Seq percent confirming:97.931
LEAP-Seq n confirming:284
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTAATGGAGGCGCTGGTG
Suggested primer 2:GGAGCAGCGCGTTTACTTAC