Insertion junction: LMJ.RY0402.248643_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.248643
Chromosome:chromosome 9
Location:7368373
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g413123 3'UTR
Cre09.g413132 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTAGGCGCGCAGGCGCATAGCAGCATCA
Internal bar code:CATAGTACTCGAGTTATGATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:491
LEAP-Seq percent confirming:99.6288
LEAP-Seq n confirming:8858
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTTCCCGTCTGGTGTAT
Suggested primer 2:GTGGTACGGAGGTGCATTCT