Insertion junction: LMJ.RY0402.248737_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.248737
Chromosome:chromosome 12
Location:3343607
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g497450 FAP412 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype; Flagellar Associated Protein 412 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCTCTGCCCCGCGTACCTTGGGGCTCT
Internal bar code:GGTCGTCTAACTACCGGTATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:110
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:311
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CTATGCGACATCAGTCCACG
Suggested primer 2:TCAGCGTGGTCTTGTACAGC