Insertion junction: LMJ.RY0402.249165_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.249165
Chromosome:chromosome 6
Location:2049377
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g264550 CGL81 (1 of 4) PF09366 - Protein of unknown function (DUF1997) (DUF1997); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAGTTCTACACCGCAGTGCCCACGGAAA
Internal bar code:AACTTTGTTCAGTTTAACACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:813
LEAP-Seq percent confirming:99.4861
LEAP-Seq n confirming:6389
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCGATTGATTGTGTTTGCTG
Suggested primer 2:ACCATTCGACTTTACGGCAC