Insertion junction: LMJ.RY0402.249372_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.249372
Chromosome:chromosome 17
Location:5875496
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g739900 (1 of 1) IPR012337//IPR027417 - Ribonuclease H-like domain // P-loop containing nucleoside triphosphate hydrolase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCTGAAGCAGGCAGTGGTAGACCTGCGA
Internal bar code:GTGTCCACCCCGGCAATGCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:560
LEAP-Seq percent confirming:86.372
LEAP-Seq n confirming:938
LEAP-Seq n nonconfirming:148
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCATTGAGGAGGTAGAGG
Suggested primer 2:AAATGCTTCGTTGTGGAACC