Insertion junction: LMJ.RY0402.249430_4

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.249430
Chromosome:chromosome 14
Location:1651712
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre14.g619100 CLPR1 (1 of 2) PTHR10381//PTHR10381:SF18 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED; inactive subunit of chloroplast ClpP complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCATGACTTGAGCGGCTGTAGGGGTATT
Internal bar code:CTCACTGTGCGAATCGGGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:320
LEAP-Seq percent confirming:99.0654
LEAP-Seq n confirming:106
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTATGAGGCGCTCAAGGAAG
Suggested primer 2:GCGTAGCAAGAAGGGACAAG