Insertion junction: LMJ.RY0402.249455_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.249455
Chromosome:chromosome 10
Location:1688881
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g430150 REP27,LPA1 (1 of 1) PF11998//PF13414 - Protein of unknown function (DUF3493) (DUF3493) // TPR repeat (TPR_11); Low Photosystem II Accumulation 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATGTAGGGAACGAGAAGGGATGGGATGC
Internal bar code:GGAATATGCGGGAGAGTGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:545
LEAP-Seq percent confirming:98.6577
LEAP-Seq n confirming:441
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGTTGCTTCCAGACTTC
Suggested primer 2:CCCAACTGCTACATCCAGGT