Insertion junction: LMJ.RY0402.249516_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.249516
Chromosome:chromosome 12
Location:8381851
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g549050 STR1 Strictosidine synthase; (1 of 1) 4.3.3.2 - Strictosidine synthase / Strictosidine synthetase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACGGCTCGCACATCGCCTTTGTGAGCTC
Internal bar code:TGAGGTGTGGCCCACAGGATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:558
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTAAAAGCAAGGTCACGC
Suggested primer 2:GTACCTTTCCTTTCTGCCCC