Insertion junction: LMJ.RY0402.249834_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.249834
Chromosome:chromosome 3
Location:8983262
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g209393 (1 of 2) K05894 - 12-oxophytodienoic acid reductase (OPR) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTACAGCGCCAGCCAGTCTGGCAACGTAG
Internal bar code:ATAGAGGGAAGGAGGCGGCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:518
LEAP-Seq percent confirming:24.9135
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:217
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGTTGCATTCCCGGTAG
Suggested primer 2:CGTGTGTAGCTCTCACCCAA