Insertion junction: LMJ.RY0402.249852_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.249852
Chromosome:chromosome 1
Location:1764879
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g009500 CDPK3,CDPK5 Calcium/calmodulin-dependent protein kinase; (1 of 2) PF00069//PF13499 - Protein kinase domain (Pkinase) // EF-hand domain pair (EF-hand_7) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCAGCAGCCATCGCCGATGGTTTCGAC
Internal bar code:CGGGCACCGCTTTCCGTGGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:398
LEAP-Seq percent confirming:66.291
LEAP-Seq n confirming:647
LEAP-Seq n nonconfirming:329
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTAAACTCCACGCAGGAC
Suggested primer 2:ATGAGGTCCACCGTTTCAAG