Insertion junction: LMJ.RY0402.249999_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.249999
Chromosome:chromosome 12
Location:3042472
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g500650 RNB2 (1 of 1) PTHR23355//PTHR23355:SF39 - RIBONUCLEASE // SUBFAMILY NOT NAMED; chloroplast RNase II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAAGGGAAGGAGCCAAGGAGGTCCCGCA
Internal bar code:GCCAGGGGCGCGGAGGTAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:553
LEAP-Seq percent confirming:98.3835
LEAP-Seq n confirming:1339
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGTGTTGAAGGGATGTT
Suggested primer 2:AGAACTGGTTCGTGGTGGAC