Insertion junction: LMJ.RY0402.250085_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.250085
Chromosome:chromosome 3
Location:8010171
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g201550 MMP20 Matrix metalloproteinase; (1 of 1) IPR000095//IPR008752 - CRIB domain // Peptidase M11, gametolysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCACGGGGCCGGCGCTGCCCATTGGATC
Internal bar code:ACTCTCGTCCGTTTCTGTCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:843
LEAP-Seq percent confirming:99.6723
LEAP-Seq n confirming:13383
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTGTGTGCATGTGATGA
Suggested primer 2:CAGGTCTAGCATGGTGAGCA