Insertion junction: LMJ.RY0402.250087_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.250087
Chromosome:chromosome 9
Location:7115012
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g411850 (1 of 2) PTHR23130:SF61 - DEFENSE PROTEIN L(2)34FC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGGAGGGAGCTCTTCTTGGTAAGTCTA
Internal bar code:ACAGAGAGGGCACGCTTGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1157
LEAP-Seq percent confirming:98.6612
LEAP-Seq n confirming:1695
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCGTCAGTATTGACAGGT
Suggested primer 2:TATGCGTGCCTCTCGTACTG