Insertion junction: LMJ.RY0402.250583_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.250583
Chromosome:chromosome 3
Location:3864314
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g171000 (1 of 1) IPR003072//IPR006569//IPR008942 - Orphan nuclear receptor, NOR1 type // CID domain // ENTH/VHS 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTTTAACACGCCTGGGTGGGCTTCGTTT
Internal bar code:TTCGGATGCGGTTTTGATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:413
LEAP-Seq percent confirming:97.9779
LEAP-Seq n confirming:533
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CACACATGTGCACCAATCAA
Suggested primer 2:GCAGCAGCAGCAGTAGTAGC