Insertion junction: LMJ.RY0402.250856_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.250856
Chromosome:chromosome 9
Location:2994929
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g387550 CGL142 Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACGCATCCGCCCATGCGTCTGCAGAGTC
Internal bar code:ACCCGAGTAGGAGGTGATTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:26
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCACTGCCCCTGTTACTTGT
Suggested primer 2:TGAGTTAGGTCGTGCAGTGG