Insertion junction: LMJ.RY0402.250856_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.250856
Chromosome:chromosome 16
Location:7018848
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g677989 (1 of 2) PF06977 - SdiA-regulated (SdiA-regulated) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAAATCGGGGTGTGGGGGGGATGGCGTG
Internal bar code:AACCCGGGTCCTTGGGAGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:471
LEAP-Seq percent confirming:99.3197
LEAP-Seq n confirming:146
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGGGAGAAGGAAAGGGAA
Suggested primer 2:ACTTCCATGAAACCTGCACC