Insertion junction: LMJ.RY0402.251158_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.251158
Chromosome:chromosome 9
Location:4828290
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g397475 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTTTGAAAGAATCATGGCATGTATGT
Internal bar code:ACCGAGTCGGGGCCGGAACCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:686
LEAP-Seq percent confirming:91.3769
LEAP-Seq n confirming:657
LEAP-Seq n nonconfirming:62
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGTCGGCTCCTAAACAA
Suggested primer 2:ATGGGACAGTGGTAAGGCAG