Insertion junction: LMJ.RY0402.251436_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.251436
Chromosome:chromosome 10
Location:3663452
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g445850 MAE14 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATCTGTTTGACAGCTGGTCTGAGGGACG
Internal bar code:TCAATCCCCGCGTCGACCGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:577
LEAP-Seq percent confirming:83.8226
LEAP-Seq n confirming:1399
LEAP-Seq n nonconfirming:270
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCTGCCCACACTATGTA
Suggested primer 2:GCAGGAGTTCTTGGCTTCAC