Insertion junction: LMJ.RY0402.251614_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.251614
Chromosome:chromosome 8
Location:3367864
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g374250 SAG1 (1 of 80) IPR003882 - Pistil-specific extensin-like protein; Plus agglutinin protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGAGGCATGGCCGACCGACCAACCTTGG
Internal bar code:CCCATGAAATCCGTTGGCCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:259
LEAP-Seq percent confirming:99.1247
LEAP-Seq n confirming:453
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGGTCGTCTAAGGCAG
Suggested primer 2:CCTGGCTACAACTCGCTTCT