Insertion junction: LMJ.RY0402.251614_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.251614
Chromosome:chromosome 8
Location:3367962
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g374250 SAG1 (1 of 80) IPR003882 - Pistil-specific extensin-like protein; Plus agglutinin protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTAAAGAAACGTGTGGTAAATGTTATG
Internal bar code:CCGCCGGTGTCTGTTTCGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:568
LEAP-Seq percent confirming:88.651
LEAP-Seq n confirming:414
LEAP-Seq n nonconfirming:53
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGGTCGTCTAAGGCAG
Suggested primer 2:TTGTGCCCTTGTGTCAATGT