Insertion junction: LMJ.RY0402.251761_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.251761
Chromosome:chromosome 4
Location:3021749
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g225050 (1 of 3) PF16166 - Chloroplast import apparatus Tic20-like (TIC20) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCATGCTTTTGTTTTTGGAGGGTGCAAC
Internal bar code:GGTTACCGTGCGTTATTTGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:530
LEAP-Seq percent confirming:98.7937
LEAP-Seq n confirming:819
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTCCTGGAGAAGACAGC
Suggested primer 2:CTCAAGTGCTTCAAGAGGGG