Insertion junction: LMJ.RY0402.251965_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.251965
Chromosome:chromosome 4
Location:1359003
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g214501 PNP1,PNT2 Chloroplast polyribonucleotide phosphorylase; (1 of 1) 2.7.7.8 - Polyribonucleotide nucleotidyltransferase / Polynucleotide phosphorylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGACTGTTGCGGGGAGACAGCATATGGA
Internal bar code:TTATTGCTCGGTAAAGAGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:277
LEAP-Seq percent confirming:97.9644
LEAP-Seq n confirming:385
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TATAAGTGAAGGCGAACGGG
Suggested primer 2:GCCATGCAGCTACTGTGAAA