Insertion junction: LMJ.RY0402.251971_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.251971
Chromosome:chromosome 10
Location:367976
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g420500 (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAGGGAGAGGGAAGAAAGGGGTTCTTG
Internal bar code:ATCGACTCGCGGTGCTTTACCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:342
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:176
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AAACAGACCAAACAGACCCG
Suggested primer 2:ATGTGCGTGTGATGTGTGTG