Insertion junction: LMJ.RY0402.252042_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.252042
Chromosome:chromosome 4
Location:1365949
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g214501 PNP1,PNT2 Chloroplast polyribonucleotide phosphorylase; (1 of 1) 2.7.7.8 - Polyribonucleotide nucleotidyltransferase / Polynucleotide phosphorylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAACTGCCGTGTAGCAACAAGCGGGGCC
Internal bar code:TCCGAGAAGCGACGGATTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:296
LEAP-Seq percent confirming:99.1837
LEAP-Seq n confirming:243
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TAACCTGCTTGCAGCATTTG
Suggested primer 2:CGAAACAACCTCTATCCCGA