Insertion junction: LMJ.RY0402.252087_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.252087
Chromosome:chromosome 17
Location:2690535
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g717850 PHC8 (1 of 1) IPR003882//IPR024616//IPR027417 - Pistil-specific extensin-like protein // Pherophorin // P-loop containing nucleoside triphosphate hydrolase; Pherophorin-chlamydomonas homolog 8 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGAACGTGGGATTGCCCCATCGGACAGT
Internal bar code:CGAAGCGGTCAGTTGCTATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:608
LEAP-Seq percent confirming:98.7448
LEAP-Seq n confirming:708
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGCGAGCGTTCTTTATT
Suggested primer 2:AGAACCGTTGCAGTACGCTT