Insertion junction: LMJ.RY0402.252421_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.252421
Chromosome:chromosome 2
Location:2758288
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g093950 PUMPKIN (1 of 1) 2.7.4.22 - UMP kinase / Uridylate kinase; Putative plastid UMP kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGGTCATGAGCAAGACGCGACCCGGCT
Internal bar code:TGTACGTTATTGACTCGGGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:956
LEAP-Seq percent confirming:99.7016
LEAP-Seq n confirming:5012
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GATCTATCGCTGCGTGTTCA
Suggested primer 2:GTCACCTTTCATCTTCGGGA