Insertion junction: LMJ.RY0402.252532_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.252532
Chromosome:chromosome 17
Location:1587753
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g707650 SNRK2L (1 of 4) PTHR24343//PTHR24343:SF167 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATTCAACTGGCGCAACTATCAGCCCGCC
Internal bar code:AGCACTTATAAAACAGAATGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:455
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:304
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGTTCTGAGCAGAGGGT
Suggested primer 2:GCAGAGGTGTAAAGGACCGA