Insertion junction: LMJ.RY0402.252675_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.252675
Chromosome:chromosome 8
Location:3383006
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g374300 CGL115 (1 of 1) K19323 - ataxin-10 (ATXN10); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAGGGGCCTAGAGCGGGGAGAGGGAGA
Internal bar code:CTTTTTGTGAGGTTCAATACAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:683
LEAP-Seq percent confirming:98.6566
LEAP-Seq n confirming:2864
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATCACCGCATATCTTCT
Suggested primer 2:CATGATAGGCCTGAAACGGT