Insertion junction: LMJ.RY0402.252717_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.252717
Chromosome:chromosome 16
Location:3127038
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g665650 HFLX1,HFLX Putative chloroplast GTP-bidning protein involved in ribosome hibernation or ribosome biogenesis; (1 of 1) K03665 - GTP-binding protein HflX (hflX) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGAAAGCAGTACCCGGCCCGAGCATGAA
Internal bar code:ATGCACATGAGGGTGACTTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:629
LEAP-Seq percent confirming:98.8327
LEAP-Seq n confirming:1524
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTGTTCCAAGGGATTCG
Suggested primer 2:ATCAGCACCACATACACGGA