Insertion junction: LMJ.RY0402.252905_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.252905
Chromosome:chromosome 17
Location:2691377
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g717850 PHC8 (1 of 1) IPR003882//IPR024616//IPR027417 - Pistil-specific extensin-like protein // Pherophorin // P-loop containing nucleoside triphosphate hydrolase; Pherophorin-chlamydomonas homolog 8 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTGCTGGCCATTAGGTATTAGCACACA
Internal bar code:TCATCTGTCTAAAATATACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:77
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:114
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGAGGTGCCACGGATAAC
Suggested primer 2:GCTTTGTGTGGTTCCATCCT