Insertion junction: LMJ.RY0402.252964_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.252964
Chromosome:chromosome 9
Location:7115646
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g411850 (1 of 2) PTHR23130:SF61 - DEFENSE PROTEIN L(2)34FC 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCCTCTTCGTATACCGTATGACCTGGT
Internal bar code:CTCTGACAGACATTCGGCACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:375
LEAP-Seq percent confirming:99.5329
LEAP-Seq n confirming:2131
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATACAAACGCTTGTTTGGGC
Suggested primer 2:CGTGTGGCTTGGTATGTTTG