Insertion junction: LMJ.RY0402.253052_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.253052
Chromosome:chromosome 3
Location:7687431
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g203730 DEGO1,DEG12 Inactive Deg protease; (1 of 4) PTHR22939//PTHR22939:SF83 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PROTEASE DO-LIKE 2, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCACGACGGAAGGAAACACGCAGGACG
Internal bar code:TCTCTGGGTGTTCGTCATAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:527
LEAP-Seq percent confirming:33.2119
LEAP-Seq n confirming:1003
LEAP-Seq n nonconfirming:2017
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTTAGCGAGCACAAGGGAAG
Suggested primer 2:AACGTAACAAGGACGATGGC