Insertion junction: LMJ.RY0402.253177_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.253177
Chromosome:chromosome 6
Location:8500200
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g307800 CYN49 (1 of 1) IPR003609//IPR029000 - PAN/Apple domain // Cyclophilin-like domain; Cyclophilin 49 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCATCAGCGGTGGCCGTGGGGAGTGCTTT
Internal bar code:GACATGGTGTACTCGAAGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:339
LEAP-Seq percent confirming:99.7817
LEAP-Seq n confirming:457
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTTGGCATACAGGGCATC
Suggested primer 2:ATCGTTCTCAATTTGTCCGC