Insertion junction: LMJ.RY0402.253404_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.253404
Chromosome:chromosome 9
Location:5917509
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g402589 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGGCGTGCGTGTCGGGTGGTCTGGCGG
Internal bar code:CGTTCGATCAAATTAGGTCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:862
LEAP-Seq percent confirming:88.6139
LEAP-Seq n confirming:179
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTCGAAGCAGAGGAGGA
Suggested primer 2:CCTTGGCCACACTACCTGAT