Insertion junction: LMJ.RY0402.253579_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.253579
Chromosome:chromosome 16
Location:284169
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g694201 (1 of 1) PTHR12461//PTHR12461:SF46 - HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED // SUBFAMILY NOT NAMED; Cupin- Jumonji-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAGGGATCGGGTATGAGTGTCTTGTTGT
Internal bar code:AGTGCGTGCTACGGCCCCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:519
LEAP-Seq percent confirming:98.8739
LEAP-Seq n confirming:439
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTCAATGCACACACCCAA
Suggested primer 2:TTATCACAGAGCAACGCGAC