Insertion junction: LMJ.RY0402.253632_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.253632
Chromosome:chromosome_10
Location:4406709
Confidence (%):95
Locus systematic id Locus common name Defline Orientation Feature
Cre10.g451500 SRR28,CHI5 Chitinase-like hydrolase antisense intron

Insertion site details

Flanking sequence (orientation from cassette outwards):TTCCCCCATAGTAGCCGGTGCGGCTGCCGC
Internal bar code:TAATGCTATGATCGGTCGCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:64
LEAP-Seq percent confirming:92.6335
LEAP-Seq n confirming:503
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CACTTGACCACCACATCCAG
Suggested primer 2:CGCTCATTGTCTCCAAGTCA