Insertion junction: LMJ.RY0402.253646_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.253646
Chromosome:chromosome 3
Location:1580320
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g152500 (1 of 5) IPR000104//IPR001214 - Antifreeze protein, type I // SET domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTTTGGGTGAGAGCGCAACCCTCCAAGA
Internal bar code:ACGTCACTTCAGGTTTTGTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:188
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCTAGCAAGACTGGCGGTAG
Suggested primer 2:ACTCCACCGTATTCAGGCAC