Insertion junction: LMJ.RY0402.253661_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.253661
Chromosome:chromosome 14
Location:2526625
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre14.g625350 MAE17 MATE efflux family protein; (1 of 3) PTHR11206:SF95 - MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCGCTGGCCATCGTGCCGCTGCACCTGC
Internal bar code:GCGTAGCCAAGCGCTGGCGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:620
LEAP-Seq percent confirming:99.1765
LEAP-Seq n confirming:843
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACGACAAGCTATGTGAA
Suggested primer 2:TTTCGGAAGGCAGGAGAGTA