Insertion junction: LMJ.RY0402.253944_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.253944
Chromosome:chromosome 6
Location:7596483
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g301100 (1 of 5) PF04232 - Stage V sporulation protein S (SpoVS) (SpoVS) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCGGGGCTGGCGGGGTAAGTGTGCATA
Internal bar code:AGAAAGCATTGAGACTTAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:626
LEAP-Seq percent confirming:99.3227
LEAP-Seq n confirming:2493
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCGCATCGCCTTTCTCTA
Suggested primer 2:TCTCTCCCATCATCCACTCC