Insertion junction: LMJ.RY0402.254297_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.254297
Chromosome:chromosome 3
Location:7631901
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g204350 CLPR4 (1 of 3) PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED; inactive subunit of chloroplast ClpP complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCAGGGGAAGGGCGAGTTGCAGGTTTGT
Internal bar code:GGGCCGCCGCCCGAGCGGATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:560
LEAP-Seq percent confirming:99.0196
LEAP-Seq n confirming:202
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTAGAGGTGGTCAGGTG
Suggested primer 2:CGTTTTTGTGTGTGTGGAGG