Insertion junction: LMJ.RY0402.254449_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.254449
Chromosome:chromosome 12
Location:4075350
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre12.g517700 NYC1,SDR21 (1 of 2) K13606 - chlorophyll(ide) b reductase (NOL, NYC1); Chlorophyll b reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTGCTGTCGCTCGGTTTCGGGCAACGTG
Internal bar code:GTCATCTCGTCGCCGCTTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:163
LEAP-Seq percent confirming:96.5839
LEAP-Seq n confirming:311
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAGCAGGAAAGGAGAGGA
Suggested primer 2:CACATCTTCAACATGGACGG