Insertion junction: LMJ.RY0402.254468_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.254468
Chromosome:chromosome 2
Location:5120834
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre02.g105026 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGCTGCAGCTTGGTCGGCTGCTCGAAG
Internal bar code:TGTGAAGACCAAAGGAGAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:340
LEAP-Seq percent confirming:99.631
LEAP-Seq n confirming:270
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGGCAAAAACGAAGAAG
Suggested primer 2:TACAAGACCTCCAAGGTGGG